PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR08G14740.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 392aa    MW: 41207.4 Da    PI: 5.0753
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR08G14740.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.12.9e-16272325558
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                      +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++N++L+k+ ee+ ++ ++
  LPERR08G14740.1 272 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNMELQKKQEEMMEMQKR 325
                      79********************************************99999765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.7E-15267322No hitNo description
SMARTSM003385.0E-14268332IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.231270326IPR004827Basic-leucine zipper domain
CDDcd147077.26E-25272324No hitNo description
PfamPF001705.8E-14272325IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-11272326No hitNo description
PROSITE patternPS000360275290IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MDLKDGGGAE RRGAAAAGAA PLSRQGSIYS LTFDELGGGL GKDFGSMNMD ELLRSIWTAE  60
ESQAMASASG GAAPAAGLQR QGSLTLPRTL SVKTVDEVWR DFEREVSPDA ATGGGGGEQQ  120
PGRQPTLGEM TLEEFLVRAG VVRENPAAAA AMVAAAAAAP PVAPRSIQTV NNSSIFFGNF  180
GAANDGAGAG AMGFSPVGIG DPTMGNGLMS GVAGIGGGAI TVTSVDTSVG TMDSAGKGEG  240
DLSSPMAPVP YPFESVIRGR RSGGNVEKVV ERRQRRMIKN RESAARSRAR KQAYTMELEA  300
EVQKLKEQNM ELQKKQEEMM EMQKRLFPDM QKNQGGGSSL RSGQQSIRTE EALLKKNIDR  360
SLISLSQKFG SFCSLLILQT AVEWELELPA AD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0371170.0KT037117.1 Oryza sativa Indica Group cultivar Nonabokra abscisic acid inducible bZIP protein (TRAB1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015650926.11e-154PREDICTED: bZIP transcription factor TRAB1
SwissprotQ6ZDF31e-138TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBLA0A0D9X8T50.0A0A0D9X8T5_9ORYZ; Uncharacterized protein
STRINGORGLA08G0211300.11e-146(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19290.38e-34ABRE binding factor 4